Cenozoic alkali basalts in Southeast (SE) China generally are genetically related to intracontinental rifting. Hence, they can be used to probe the nature of their underlying mantle sources and aid studies of the tectonic background in this region. This paper focuses on the Shanhoujian alkali basalts located in Bailing County, northeastern Fujian, SE China. We herein report their petrology, whole-rock major, and trace element geochemistry, and Sr-Nd isotopic composition and provide a new zircon U-Pb age for the basalts (similar to 40 Ma, Eocene). These data help to constrain the petrogenesis of alkali basalts, their mantle source, and tectonic settings. The basalts are characterized by high Mg-#(58.21-63.52) with Na2O/K2O > 1. MgO content is weakly correlated with CaO and Cr content but shows no correlation with Ni and Fe2O3(total). Such features suggest that fractionation of clinopyroxene rather than olivine was important. In terms of trace elements, the alkali basalts display: (1) enrichment in La, Ce, Rb, Ba, Nb, and Ta and depletion in K, Pb, Zr, Hf, and Ti and (2) notable fractionation of light rare earth elements from heavy rare earth elements. Determined (Sr-87/Sr-86)(i)is in the range of 0.7041-0.7040 and epsilon(Nd)(t) is between +3.2 and +3.3. The Shanhoujian alkali basalts show a notable affinity to oceanic island basalts (OIBs) with little assimilation of crustal materials. They were derived from a pyroxenite and carbonated peridotite mantle source metasomatized by sediments carried by the subduction plate at different depths. The primary magmas of these basalts were derived from partial melting of this metasomatized mantle source during upwelling of the asthenospheric mantle as an intracontinental rift formed through extension in this part of SE China.